Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921832.1_cds_XP_016470725.1_63140
CDS Infomation

[gene=LOC107792972] [db_xref=GeneID:107792972] [protein=clathrin light chain 1-like isoform X2] [protein_id=XP_016470725.1] [location=complement(join(45506..45735,45796..46297,46376..46529,49293..49702))] [gbkey=CDS]
Sequence

ATGGAGAATTTCGATGGTGAAGAGATCCCGTCGACCACAAGTACCTTTGACGATCACAAC
TACAACGGCTACGACGTTCATTCCCAGCGTTACGAGTTCGACGTTCCCTCAGCCGATGAT
GGCGGTGTTCCTCCGCCGGTTCCATCTGATATAGACGATTTCTCCACCGGTGAACAGCAG
CAACATTACTACCATCATGATAACATGCAGTCGCCGGAGAATAATGGCGAGTATCATAGT
TCACCTTTTGAGACATCGGAGGATCATTATCAAGGATCTGGTGTGCAATCCAAGCCCTAT
GATCTCGGAACTGATACAGATGGCATTTTCTCCTCCGGTACTGATGGACCGTTGCTTCCC
GATCCTACTGAGATGCGTGAAGAAGGTGCTGCTTTTCGCGAATGGCGTCGCCAAAATGCC
ATTTATCTTGAGGAGAAGGAGAAGAAGGAAAAGGAAATGAGGAATCAGATTATCGCTGAA
GCTGAGGAGTACATACGATCATTTTATGAGAAACGGAAGCTTAATTGCGAGACCAACAAA
TCTAATAACCGAGAAAGGGAGAAATTGTACCTGGCCAACCAAGAGAAATTTCACAAAGAA
GCTCACAAACAATACTTTAAAGCAATTGCAGAGATTATACCGCGTGAGGTCCCTAATATT
GAGAAGAGGCGAGGCAAGAAGGAGGAAGAGAGGAAGCCATCAGTTGCAGTTATCCAGGGC
CCAAAGCCTGGGAAACCCACTGACCTGTCTAGAATGCGCCAGCTTTTTGTCAAGCTGAAG
CAGAACCCTCCACCACATATGCTACCTCCTCCTGAGAAAGACAAGGATGGTAAGGATGGA
AAGGAAGGAAAGGATGCCAAGGATGCGAAGGAAGGAAAGGACGCCAAGGACATGAAGGAA
CGAAAGGATGCCAAAAATGAAAAGATTTCTACACCAAAGGAGGCTAAGGATGACAAAAAT
GAGAAAATCGCGACACCAAAGGTGGCTAAGGATGCCAAAAATGAGAAAAGTCCCATAGGA
AAGGCAGTTAATGATGCCAAGAATGCGGAAAATGCCGCACAACAAGGATCTCCAGCTGCT
GCTATTGACAAGGTTGTTTCACCAGTCAAGGATGCTGCACAACAAGGATCTCCAGCTGCT
GCTATTGACAAGCTTGTTTCACCAGTCAAGGATGCTGCACAACAAGGATCTCCGGCTGCT
GCTAGTGTTGGTACTCCAAAAGGACCAAAGGCCGATACACCAACTTCAGTCGAAGGCGGA
CAAGCTGCAGAAAGTGATTCTGCCTCAACTGCATAA

Peptide Sequence

PEP ID

XP_016470725.1
PEP Infomation

PREDICTED: clathrin light chain 1-like isoform X2 [Nicotiana tabacum]
Sequence

MENFDGEEIPSTTSTFDDHNYNGYDVHSQRYEFDVPSADDGGVPPPVPSDIDDFSTGEQQ
QHYYHHDNMQSPENNGEYHSSPFETSEDHYQGSGVQSKPYDLGTDTDGIFSSGTDGPLLP
DPTEMREEGAAFREWRRQNAIYLEEKEKKEKEMRNQIIAEAEEYIRSFYEKRKLNCETNK
SNNREREKLYLANQEKFHKEAHKQYFKAIAEIIPREVPNIEKRRGKKEEERKPSVAVIQG
PKPGKPTDLSRMRQLFVKLKQNPPPHMLPPPEKDKDGKDGKEGKDAKDAKEGKDAKDMKE
RKDAKNEKISTPKEAKDDKNEKIATPKVAKDAKNEKSPIGKAVNDAKNAENAAQQGSPAA
AIDKVVSPVKDAAQQGSPAAAIDKLVSPVKDAAQQGSPAAASVGTPKGPKADTPTSVEGG
QAAESDSASTA

Transcript Sequence

Gene sequence data has not been registered.